1. Jin, Z., Huang, W., Shen, N., Li, J., Wang, X., Dong, J., Park, P. and Xi, R.* (2022) Single cell gene fusion detection by scFusion, Nature Communications, 13, 1084.
2. Wu, L., Wang, H., Xia, Y. and Xi, R.* (2020) CNV-BAC: Copy number Variation Detection in Bacterial Circular Genome. Bioinformatics, 36(12), 3890-3891.
3. Chen, C., Wu, C., Wu, L. Wang, X., Deng, M. and Xi, R.* (2020) scRMD: Imputation for single cell RNA-seq data via robust matrix decomposition. Bioinformatics, 36(10), 3156-3161.
4. Xia,Y.#, Liu, Y.#, Deng, M. and Xi, R.* (2019) Detecting virus integration sites based on multiple related sequencing data by VirTect, BMC Medical Genomics, 12(1), 19.
5. Chen, C., Xi, R.* and Lin, N. (2018) Community detection by L0-penalized graph Laplacian. Electronic Journal of Statistics, 12(1), 1842-1866.
6. Xia, Y., Liu, Y., Deng, M. and Xi, R.* (2017) SVmine improves structural variation detection by integrative mining of predictions from multiple algorithms, Bioinformatics, 33(21):3348-3354.
7. Yuan, H., Xi, R.*, Chen, C. and Deng, M. (2017) Differential network analysis via lasso penalized D-trace loss, Biometrika, 104 (4): 755-770.
8. Xia, Y., Liu Y., Deng, M. and Xi, R.* (2017) Pysim-sv: a package for simulating structural variation data with GC-biases. BMC Bioinformatics, 18(Suppl 3):53.
9. Xi, R.*, Lee, S., Xia, Y., Kim, T. and Park, P. J.* (2016) Copy number analysis of whole genome data using BIC-seq2 and its application to detection of cancer susceptibility variants, Nucleic Acids Research, 44(13):6274-6286.
10. Xi, R.*, Li, Y. and Hu, Y. (2015) Bayesian quantile regression based on the empirical likelihood with spike and slab priors, Bayesian Analysis, 11(3): 821-855.